Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIS64348.1 | SIS71085.1 | SAMN05421759_10214 | SAMN05421759_102542 | malonyl-CoA/methylmalonyl-CoA synthetase. | Cytochrome P450. | 0.691 |
SIS64348.1 | SIS76976.1 | SAMN05421759_10214 | SAMN05421759_103132 | malonyl-CoA/methylmalonyl-CoA synthetase. | Cytochrome P450. | 0.691 |
SIS64348.1 | SIT07410.1 | SAMN05421759_10214 | SAMN05421759_1146 | malonyl-CoA/methylmalonyl-CoA synthetase. | PAP2 superfamily protein. | 0.643 |
SIS64348.1 | rplF | SAMN05421759_10214 | SAMN05421759_11564 | malonyl-CoA/methylmalonyl-CoA synthetase. | Large subunit ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.806 |
SIS64760.1 | SIT07399.1 | SAMN05421759_10244 | SAMN05421759_1145 | Hypothetical protein. | Transcriptional regulatory protein, C terminal. | 0.458 |
SIS64760.1 | SIT07410.1 | SAMN05421759_10244 | SAMN05421759_1146 | Hypothetical protein. | PAP2 superfamily protein. | 0.786 |
SIS64981.1 | SIS71085.1 | SAMN05421759_10261 | SAMN05421759_102542 | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | Cytochrome P450. | 0.691 |
SIS64981.1 | SIS76976.1 | SAMN05421759_10261 | SAMN05421759_103132 | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | Cytochrome P450. | 0.691 |
SIS64981.1 | SIT07410.1 | SAMN05421759_10261 | SAMN05421759_1146 | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | PAP2 superfamily protein. | 0.643 |
SIS64981.1 | rplF | SAMN05421759_10261 | SAMN05421759_11564 | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | Large subunit ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.806 |
SIS65569.1 | SIS71085.1 | SAMN05421759_102106 | SAMN05421759_102542 | fatty-acyl-CoA synthase. | Cytochrome P450. | 0.691 |
SIS65569.1 | SIS76976.1 | SAMN05421759_102106 | SAMN05421759_103132 | fatty-acyl-CoA synthase. | Cytochrome P450. | 0.691 |
SIS65569.1 | SIT07410.1 | SAMN05421759_102106 | SAMN05421759_1146 | fatty-acyl-CoA synthase. | PAP2 superfamily protein. | 0.643 |
SIS65569.1 | rplF | SAMN05421759_102106 | SAMN05421759_11564 | fatty-acyl-CoA synthase. | Large subunit ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.806 |
SIS71085.1 | SIS64348.1 | SAMN05421759_102542 | SAMN05421759_10214 | Cytochrome P450. | malonyl-CoA/methylmalonyl-CoA synthetase. | 0.691 |
SIS71085.1 | SIS64981.1 | SAMN05421759_102542 | SAMN05421759_10261 | Cytochrome P450. | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | 0.691 |
SIS71085.1 | SIS65569.1 | SAMN05421759_102542 | SAMN05421759_102106 | Cytochrome P450. | fatty-acyl-CoA synthase. | 0.691 |
SIS71085.1 | SIS76976.1 | SAMN05421759_102542 | SAMN05421759_103132 | Cytochrome P450. | Cytochrome P450. | 0.525 |
SIS71085.1 | SIT07410.1 | SAMN05421759_102542 | SAMN05421759_1146 | Cytochrome P450. | PAP2 superfamily protein. | 0.754 |
SIS71085.1 | rplF | SAMN05421759_102542 | SAMN05421759_11564 | Cytochrome P450. | Large subunit ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.955 |
page 1 of 3