STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT11451.1DNA-binding transcriptional regulator, CsgD family. (183 aa)    
Predicted Functional Partners:
SIS77661.1
Cytochrome b.
     0.742
SIT11458.1
Hypothetical protein.
       0.725
SIT10246.1
Glyoxylase, beta-lactamase superfamily II.
  
 
   0.599
SIS83305.1
Acyl homoserine lactone synthase.
  
 
 0.581
SIT18645.1
Acyl homoserine lactone synthase.
  
 
 0.581
SIT11467.1
Hypothetical protein.
       0.557
SIS58043.1
Glyoxylase, beta-lactamase superfamily II.
  
 
   0.489
SIS60462.1
Glyoxylase, beta-lactamase superfamily II.
  
 
   0.459
SIS67444.1
Hypothetical protein.
  
     0.416
SIS76164.1
Response regulator receiver domain-containing protein.
   
  0.413
Your Current Organism:
Roseivivax lentus
NCBI taxonomy Id: 633194
Other names: CCUG 57755, DSM 29430, KCTC 22708, R. lentus, Roseivivax lentus Park et al. 2010, Roseivivax sp. S5-5, strain S5-5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.