STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT11551.1Calcineurin-like phosphoesterase. (314 aa)    
Predicted Functional Partners:
SIS95320.1
Ubiquinone/menaquinone biosynthesis C-methylase UbiE.
 
 
   0.745
ubiG
3-demethylubiquinone-9 3-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family.
   
   0.706
SIS50432.1
Mg-protoporphyrin IX methyltransferase.
   
   0.706
SIS69758.1
Ubiquinone/menaquinone biosynthesis C-methylase UbiE.
   
   0.706
SIS71249.1
3-demethylubiquinone-9 3-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway. Belongs to the methyltransferase superfamily. UbiG/COQ3 family.
   
   0.706
SIT09144.1
Macrocin-O-methyltransferase (TylF).
   
   0.706
SIT16979.1
Putative zinc binding domain-containing protein.
   
   0.706
SIT16984.1
Methyltransferase domain-containing protein.
   
   0.706
SIS67223.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
     0.428
Your Current Organism:
Roseivivax lentus
NCBI taxonomy Id: 633194
Other names: CCUG 57755, DSM 29430, KCTC 22708, R. lentus, Roseivivax lentus Park et al. 2010, Roseivivax sp. S5-5, strain S5-5
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