STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT14591.1LuxR family transcriptional regulator. (263 aa)    
Predicted Functional Partners:
SIS83305.1
Acyl homoserine lactone synthase.
 
 
 0.723
SIT18645.1
Acyl homoserine lactone synthase.
 
 
 0.721
SIS79009.1
Endonuclease/Exonuclease/phosphatase family protein.
  
     0.680
SIS58043.1
Glyoxylase, beta-lactamase superfamily II.
    
   0.605
SIT00560.1
Glyoxylase, beta-lactamase superfamily II.
    
   0.605
SIS69820.1
Hypothetical protein.
  
     0.603
SIS83317.1
DNA-binding transcriptional regulator, CsgD family.
  
 0.558
SIS70547.1
4-carboxymuconolactone decarboxylase.
  
     0.501
SIS94582.1
Two component transcriptional regulator, LuxR family.
   
 0.493
SIT00175.1
Regulatory protein, luxR family.
   
 0.493
Your Current Organism:
Roseivivax lentus
NCBI taxonomy Id: 633194
Other names: CCUG 57755, DSM 29430, KCTC 22708, R. lentus, Roseivivax lentus Park et al. 2010, Roseivivax sp. S5-5, strain S5-5
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.