Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIS66238.1 | SIT15317.1 | SAMN05421759_102157 | SAMN05421759_1228 | Arylsulfatase. | Polyketide-type polyunsaturated fatty acid synthase PfaA. | 0.635 |
SIS66238.1 | SIT15335.1 | SAMN05421759_102157 | SAMN05421759_12210 | Arylsulfatase. | Polyhydroxybutyrate depolymerase. | 0.418 |
SIS66238.1 | SIT15358.1 | SAMN05421759_102157 | SAMN05421759_12213 | Arylsulfatase. | Short-chain dehydrogenase. | 0.609 |
SIS98584.1 | SIT15270.1 | SAMN05421759_108172 | SAMN05421759_1222 | Multidrug resistance efflux pump. | Lipopolysaccharide biosynthesis regulator YciM, contains six TPR domains and a predicted metal-binding C-terminal domain. | 0.725 |
SIS98584.1 | SIT15279.1 | SAMN05421759_108172 | SAMN05421759_1223 | Multidrug resistance efflux pump. | Nucleoside-diphosphate-sugar epimerase. | 0.787 |
SIS98584.1 | SIT15293.1 | SAMN05421759_108172 | SAMN05421759_1225 | Multidrug resistance efflux pump. | Predicted phosphohydrolase or phosphomutase, AlkP superfamily. | 0.774 |
SIS98584.1 | SIT15312.1 | SAMN05421759_108172 | SAMN05421759_1227 | Multidrug resistance efflux pump. | Acyl transferase domain-containing protein; Belongs to the P-Pant transferase superfamily. | 0.770 |
SIS98584.1 | SIT15317.1 | SAMN05421759_108172 | SAMN05421759_1228 | Multidrug resistance efflux pump. | Polyketide-type polyunsaturated fatty acid synthase PfaA. | 0.763 |
SIS98584.1 | SIT15326.1 | SAMN05421759_108172 | SAMN05421759_1229 | Multidrug resistance efflux pump. | Sulfotransferase family protein. | 0.787 |
SIS98584.1 | SIT15335.1 | SAMN05421759_108172 | SAMN05421759_12210 | Multidrug resistance efflux pump. | Polyhydroxybutyrate depolymerase. | 0.577 |
SIS98584.1 | SIT15358.1 | SAMN05421759_108172 | SAMN05421759_12213 | Multidrug resistance efflux pump. | Short-chain dehydrogenase. | 0.696 |
SIS98584.1 | SIT15363.1 | SAMN05421759_108172 | SAMN05421759_12214 | Multidrug resistance efflux pump. | Nucleoside-diphosphate-sugar epimerase. | 0.755 |
SIT15270.1 | SIS98584.1 | SAMN05421759_1222 | SAMN05421759_108172 | Lipopolysaccharide biosynthesis regulator YciM, contains six TPR domains and a predicted metal-binding C-terminal domain. | Multidrug resistance efflux pump. | 0.725 |
SIT15270.1 | SIT15279.1 | SAMN05421759_1222 | SAMN05421759_1223 | Lipopolysaccharide biosynthesis regulator YciM, contains six TPR domains and a predicted metal-binding C-terminal domain. | Nucleoside-diphosphate-sugar epimerase. | 0.903 |
SIT15270.1 | SIT15293.1 | SAMN05421759_1222 | SAMN05421759_1225 | Lipopolysaccharide biosynthesis regulator YciM, contains six TPR domains and a predicted metal-binding C-terminal domain. | Predicted phosphohydrolase or phosphomutase, AlkP superfamily. | 0.843 |
SIT15270.1 | SIT15312.1 | SAMN05421759_1222 | SAMN05421759_1227 | Lipopolysaccharide biosynthesis regulator YciM, contains six TPR domains and a predicted metal-binding C-terminal domain. | Acyl transferase domain-containing protein; Belongs to the P-Pant transferase superfamily. | 0.863 |
SIT15270.1 | SIT15317.1 | SAMN05421759_1222 | SAMN05421759_1228 | Lipopolysaccharide biosynthesis regulator YciM, contains six TPR domains and a predicted metal-binding C-terminal domain. | Polyketide-type polyunsaturated fatty acid synthase PfaA. | 0.873 |
SIT15270.1 | SIT15326.1 | SAMN05421759_1222 | SAMN05421759_1229 | Lipopolysaccharide biosynthesis regulator YciM, contains six TPR domains and a predicted metal-binding C-terminal domain. | Sulfotransferase family protein. | 0.713 |
SIT15270.1 | SIT15335.1 | SAMN05421759_1222 | SAMN05421759_12210 | Lipopolysaccharide biosynthesis regulator YciM, contains six TPR domains and a predicted metal-binding C-terminal domain. | Polyhydroxybutyrate depolymerase. | 0.463 |
SIT15270.1 | SIT15358.1 | SAMN05421759_1222 | SAMN05421759_12213 | Lipopolysaccharide biosynthesis regulator YciM, contains six TPR domains and a predicted metal-binding C-terminal domain. | Short-chain dehydrogenase. | 0.783 |
page 1 of 5