STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT16914.1Sugar transferase. (139 aa)    
Predicted Functional Partners:
SIT06040.1
Capsular exopolysaccharide family.
 
 
 0.938
SIT05932.1
Mannose-1-phosphate guanylyltransferase/mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase.
  
 
 0.889
SIT06418.1
Mannose-1-phosphate guanylyltransferase/mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
 
 0.889
SIT16886.1
Mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase.
  
 
 0.889
SIT16909.1
Polysaccharide export outer membrane protein.
  
 
 0.779
SIT16954.1
Chromosome partitioning ATPase, Mrp family, contains Fe-S cluster.
 
 
 0.733
SIT06020.1
NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC.
 
 
 0.644
SIT18054.1
Glycosyltransferase, GT2 family.
  
 
 0.637
SIT16901.1
Hypothetical protein.
    
  0.635
SIS53529.1
Chromosome partitioning ATPase, Mrp family, contains Fe-S cluster.
 
 
 0.593
Your Current Organism:
Roseivivax lentus
NCBI taxonomy Id: 633194
Other names: CCUG 57755, DSM 29430, KCTC 22708, R. lentus, Roseivivax lentus Park et al. 2010, Roseivivax sp. S5-5, strain S5-5
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.