STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT18531.1Cytochrome c553. (180 aa)    
Predicted Functional Partners:
SIT18538.1
Hypothetical protein.
 
  
  0.943
SIS88564.1
Cytochrome c oxidase cbb3-type subunit 2.
  
 0.733
SIS88575.1
Cytochrome c oxidase cbb3-type subunit 1; Belongs to the heme-copper respiratory oxidase family.
  
 0.733
SIT15828.1
Sulfur dehydrogenase subunit SoxD.
  
 
 0.664
SIS96890.1
Cytochrome c.
 
  
  0.649
SIT15812.1
Cytochrome-dependent sulfide dehydrogenase (flavoprotein).
   
  0.558
SIT06623.1
Hypothetical protein.
   
 0.545
SIS76091.1
Sarcosine oxidase subunit alpha; Belongs to the GcvT family.
   
  0.528
SIS89027.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
   
  0.528
SIS98202.1
Ubiquinol-cytochrome c reductase cytochrome b subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
 
 
 0.518
Your Current Organism:
Roseivivax lentus
NCBI taxonomy Id: 633194
Other names: CCUG 57755, DSM 29430, KCTC 22708, R. lentus, Roseivivax lentus Park et al. 2010, Roseivivax sp. S5-5, strain S5-5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.