STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TY3B-I-4Transposon Ty3-I Gag-Pol polyprotein. (136 aa)    
Predicted Functional Partners:
POL-7
Retrovirus-related Pol polyprotein from transposon.
 
     0.515
pol-31
Retrovirus-related Pol polyprotein from transposon 17.6.
 
     0.481
FANCM
Fanconi anemia group M protein.
    
  0.475
pol-27
Retrovirus-related Pol polyprotein from transposon opus.
 
     0.430
pol-20
Retrovirus-related Pol polyprotein from transposon.
  
     0.417
POL-6
Retrovirus-related Pol polyprotein from transposon.
 
     0.417
TY3B-I-5
Transposon Ty3-I Gag-Pol polyprotein.
 
     0.408
pol-19
Retrovirus-related Pol polyprotein from transposon gypsy.
 
     0.408
Your Current Organism:
Trichinella spiralis
NCBI taxonomy Id: 6334
Other names: T. spiralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.