Smu1 protein (Trichinella spiralis) - STRING interaction network

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Score

Smu1

WD40 repeat-containing protein SMU1. (983 aa)

Predicted Functional Partners:

TAF5

0.983

MFAP1

0.952

prpf38a

0.863

Prpf6

0.832

Snrnp200

0.772

Txnl4a

0.761

NAA38

0.745

JKAMP

0.712

Lsm4

0.698

SF3B3

0.684

Your Current Organism:

Trichinella spiralis

NCBI taxonomy Id: 6334
Other names: T. spiralis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
JKAMP	SF3B3	A0A0V1BFR0	A0A0V1BTP5	JNK1/MAPK8-associated membrane protein.	Splicing factor 3B subunit 3.	0.911
JKAMP	Smu1	A0A0V1BFR0	A0A0V1ARH7	JNK1/MAPK8-associated membrane protein.	WD40 repeat-containing protein SMU1.	0.712
JKAMP	TAF5	A0A0V1BFR0	A0A0V1BQ50	JNK1/MAPK8-associated membrane protein.	Transcription initiation factor TFIID subunit 5.	0.610
Lsm4	MFAP1	A0A0V1AXE8	A0A0V1B6I4	U6 snRNA-associated Sm-like protein LSm4.	Microfibrillar-associated protein 1.	0.498
Lsm4	NAA38	A0A0V1AXE8	A0A0V1B3L2	U6 snRNA-associated Sm-like protein LSm4.	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.983
Lsm4	Prpf6	A0A0V1AXE8	A0A0V1BPF3	U6 snRNA-associated Sm-like protein LSm4.	Pre-mRNA-processing factor 6.	0.915
Lsm4	SF3B3	A0A0V1AXE8	A0A0V1BTP5	U6 snRNA-associated Sm-like protein LSm4.	Splicing factor 3B subunit 3.	0.838
Lsm4	Smu1	A0A0V1AXE8	A0A0V1ARH7	U6 snRNA-associated Sm-like protein LSm4.	WD40 repeat-containing protein SMU1.	0.698
Lsm4	Snrnp200	A0A0V1AXE8	A0A0V1B7N3	U6 snRNA-associated Sm-like protein LSm4.	U5 small nuclear ribonucleoprotein helicase.	0.937
Lsm4	TAF5	A0A0V1AXE8	A0A0V1BQ50	U6 snRNA-associated Sm-like protein LSm4.	Transcription initiation factor TFIID subunit 5.	0.562
Lsm4	Txnl4a	A0A0V1AXE8	A0A0V1BVT5	U6 snRNA-associated Sm-like protein LSm4.	Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family.	0.883
Lsm4	prpf38a	A0A0V1AXE8	A0A0V1B675	U6 snRNA-associated Sm-like protein LSm4.	Pre-mRNA-splicing factor 38A.	0.502
MFAP1	Lsm4	A0A0V1B6I4	A0A0V1AXE8	Microfibrillar-associated protein 1.	U6 snRNA-associated Sm-like protein LSm4.	0.498
MFAP1	NAA38	A0A0V1B6I4	A0A0V1B3L2	Microfibrillar-associated protein 1.	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.503
MFAP1	Prpf6	A0A0V1B6I4	A0A0V1BPF3	Microfibrillar-associated protein 1.	Pre-mRNA-processing factor 6.	0.967
MFAP1	SF3B3	A0A0V1B6I4	A0A0V1BTP5	Microfibrillar-associated protein 1.	Splicing factor 3B subunit 3.	0.916
MFAP1	Smu1	A0A0V1B6I4	A0A0V1ARH7	Microfibrillar-associated protein 1.	WD40 repeat-containing protein SMU1.	0.952
MFAP1	Snrnp200	A0A0V1B6I4	A0A0V1B7N3	Microfibrillar-associated protein 1.	U5 small nuclear ribonucleoprotein helicase.	0.923
MFAP1	TAF5	A0A0V1B6I4	A0A0V1BQ50	Microfibrillar-associated protein 1.	Transcription initiation factor TFIID subunit 5.	0.902
MFAP1	Txnl4a	A0A0V1B6I4	A0A0V1BVT5	Microfibrillar-associated protein 1.	Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family.	0.755