STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T01_11570Uncharacterized protein. (599 aa)    
Predicted Functional Partners:
GPSM2
G-protein-signaling modulator 2.
    
 
 0.795
TLN1
Talin-1.
    
 0.772
sec61g
Protein transport protein Sec61 subunit gamma.
   
 
 0.721
pi4kb
Phosphatidylinositol 4-kinase beta; Belongs to the PI3/PI4-kinase family.
   
 0.646
Farp1
FERM, RhoGEF and pleckstrin domain-containing protein 1.
     
 0.588
PIP4K2B
Phosphatidylinositol 5-phosphate 4-kinase type-2 beta.
     
 0.584
dvl3
Segment polarity protein dishevelled-like protein DVL-3.
   
 
 0.582
PIN1
Peptidyl-prolyl cis-trans isomerase.
    
 0.546
PI4KA
Phosphatidylinositol 4-kinase alpha; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. PR/SET subfamily.
   
 0.507
rpl-9
60S ribosomal protein L9.
  
  
 0.456
Your Current Organism:
Trichinella spiralis
NCBI taxonomy Id: 6334
Other names: T. spiralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.