Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cbp80 | Eif4a3 | A0A0V1B7L2 | A0A0V1BA70 | Nuclear cap-binding protein subunit 1. | Eukaryotic initiation factor 4A-III. | 0.850 |
Cbp80 | Nxf1 | A0A0V1B7L2 | A0A0V1BH68 | Nuclear cap-binding protein subunit 1. | Nuclear RNA export factor 1. | 0.870 |
Cbp80 | PCF11 | A0A0V1B7L2 | A0A0V1AWJ9 | Nuclear cap-binding protein subunit 1. | Pre-mRNA cleavage complex 2 protein Pcf11. | 0.760 |
Cbp80 | THOC2 | A0A0V1B7L2 | A0A0V1AS67 | Nuclear cap-binding protein subunit 1. | THO complex subunit 2. | 0.934 |
Cbp80 | Thoc1 | A0A0V1B7L2 | A0A0V1AVQ8 | Nuclear cap-binding protein subunit 1. | THO complex subunit 1. | 0.736 |
Cbp80 | Thoc3 | A0A0V1B7L2 | A0A0V1BXZ2 | Nuclear cap-binding protein subunit 1. | THO complex subunit 3. | 0.678 |
Cbp80 | Thoc6 | A0A0V1B7L2 | A0A0V1BRI8 | Nuclear cap-binding protein subunit 1. | THO complex subunit 6-like protein. | 0.527 |
Cbp80 | Vars2 | A0A0V1B7L2 | A0A0V1ASN5 | Nuclear cap-binding protein subunit 1. | Spliceosome RNA helicase DDX39B. | 0.839 |
Cbp80 | alyref-b | A0A0V1B7L2 | E5SF41 | Nuclear cap-binding protein subunit 1. | THO complex subunit 4-B. | 0.940 |
Cbp80 | cpsf5 | A0A0V1B7L2 | E5SGU6 | Nuclear cap-binding protein subunit 1. | Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] | 0.645 |
Eif4a3 | Cbp80 | A0A0V1BA70 | A0A0V1B7L2 | Eukaryotic initiation factor 4A-III. | Nuclear cap-binding protein subunit 1. | 0.850 |
Eif4a3 | Nxf1 | A0A0V1BA70 | A0A0V1BH68 | Eukaryotic initiation factor 4A-III. | Nuclear RNA export factor 1. | 0.665 |
Eif4a3 | PCF11 | A0A0V1BA70 | A0A0V1AWJ9 | Eukaryotic initiation factor 4A-III. | Pre-mRNA cleavage complex 2 protein Pcf11. | 0.641 |
Eif4a3 | THOC2 | A0A0V1BA70 | A0A0V1AS67 | Eukaryotic initiation factor 4A-III. | THO complex subunit 2. | 0.686 |
Eif4a3 | Thoc1 | A0A0V1BA70 | A0A0V1AVQ8 | Eukaryotic initiation factor 4A-III. | THO complex subunit 1. | 0.648 |
Eif4a3 | Thoc3 | A0A0V1BA70 | A0A0V1BXZ2 | Eukaryotic initiation factor 4A-III. | THO complex subunit 3. | 0.625 |
Eif4a3 | Thoc6 | A0A0V1BA70 | A0A0V1BRI8 | Eukaryotic initiation factor 4A-III. | THO complex subunit 6-like protein. | 0.638 |
Eif4a3 | Vars2 | A0A0V1BA70 | A0A0V1ASN5 | Eukaryotic initiation factor 4A-III. | Spliceosome RNA helicase DDX39B. | 0.949 |
Eif4a3 | alyref-b | A0A0V1BA70 | E5SF41 | Eukaryotic initiation factor 4A-III. | THO complex subunit 4-B. | 0.966 |
Eif4a3 | cpsf5 | A0A0V1BA70 | E5SGU6 | Eukaryotic initiation factor 4A-III. | Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] | 0.753 |
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