STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NUP160Nuclear pore complex protein. (1214 aa)    
Predicted Functional Partners:
Nup107
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.991
Nup133
Nuclear pore complex protein.
   
 0.987
Sec13
Protein SEC13-like protein; Belongs to the WD repeat SEC13 family.
    
 0.986
NUP205
Nuclear pore complex protein.
   
 0.984
nup85
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
   
 0.983
NUP98
Nuclear pore complex protein Nup98-Nup96.
   
 0.977
Nup155
Nuclear pore complex protein.
   
 0.973
NUP93
Nuclear pore complex protein Nup93.
   
 0.948
Nup214
Nuclear pore complex protein.
   
 0.942
Nup88
Nuclear pore complex protein Nup88.
   
 0.941
Your Current Organism:
Trichinella spiralis
NCBI taxonomy Id: 6334
Other names: T. spiralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.