T01_2424 protein (Trichinella spiralis) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

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Experiments

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[Homology]

Score

T01_2424

Uncharacterized protein. (190 aa)

Predicted Functional Partners:

rps30a

0.757

RPL21

0.606

RpL13A

0.597

RpL8

0.555

rpl-23

0.468

rplB

0.452

timm21

0.452

rpl-26

0.442

RPS23

0.437

RpS16

0.431

Your Current Organism:

Trichinella spiralis

NCBI taxonomy Id: 6334
Other names: T. spiralis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RPL21	RPS23	E5SW37	A0A0V1ARK5	60S ribosomal protein L21.	40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.	0.987
RPL21	RpL13A	E5SW37	A0A0V1AYA3	60S ribosomal protein L21.	60S ribosomal protein L13a.	0.991
RPL21	RpL8	E5SW37	E5S528	60S ribosomal protein L21.	60S ribosomal protein L8.	0.994
RPL21	RpS16	E5SW37	A0A0V1B466	60S ribosomal protein L21.	40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family.	0.986
RPL21	T01_2424	E5SW37	A0A0V1AWX5	60S ribosomal protein L21.	Uncharacterized protein.	0.606
RPL21	rpl-23	E5SW37	A0A0V1BEP2	60S ribosomal protein L21.	60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.	0.992
RPL21	rpl-26	E5SW37	E5S5A3	60S ribosomal protein L21.	60S ribosomal protein L26.	0.993
RPL21	rplB	E5SW37	A0A0V1ALJ2	60S ribosomal protein L21.	50S ribosomal protein L2.	0.936
RPL21	rps30a	E5SW37	A0A0V1B9C0	60S ribosomal protein L21.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.994
RPL21	timm21	E5SW37	A0A0V1BBB1	60S ribosomal protein L21.	Major sperm protein; Central component in molecular interactions underlying sperm crawling. Forms an extensive filament system that extends from sperm villipoda, along the leading edge of the pseudopod.	0.936
RPS23	RPL21	A0A0V1ARK5	E5SW37	40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.	60S ribosomal protein L21.	0.987
RPS23	RpL13A	A0A0V1ARK5	A0A0V1AYA3	40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.	60S ribosomal protein L13a.	0.991
RPS23	RpL8	A0A0V1ARK5	E5S528	40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.	60S ribosomal protein L8.	0.989
RPS23	RpS16	A0A0V1ARK5	A0A0V1B466	40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.	40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family.	0.996
RPS23	T01_2424	A0A0V1ARK5	A0A0V1AWX5	40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.	Uncharacterized protein.	0.437
RPS23	rpl-23	A0A0V1ARK5	A0A0V1BEP2	40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.	60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.	0.990
RPS23	rpl-26	A0A0V1ARK5	E5S5A3	40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.	60S ribosomal protein L26.	0.990
RPS23	rplB	A0A0V1ARK5	A0A0V1ALJ2	40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.	50S ribosomal protein L2.	0.931
RPS23	rps30a	A0A0V1ARK5	A0A0V1B9C0	40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.999
RPS23	timm21	A0A0V1ARK5	A0A0V1BBB1	40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.	Major sperm protein; Central component in molecular interactions underlying sperm crawling. Forms an extensive filament system that extends from sperm villipoda, along the leading edge of the pseudopod.	0.931