XAB2 protein (Trichinella spiralis) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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proteins of unknown 3D structure

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

XAB2

Pre-mRNA-splicing factor SYF1. (919 aa)

Predicted Functional Partners:

CRNKL1

0.991

SNW1

0.988

AQR

0.987

Prpf19

0.987

T01_12545

0.986

T01_13885

0.986

CDC5L

0.968

SF3B2

0.964

EFTUD2

0.962

Cdc40

0.959

Your Current Organism:

Trichinella spiralis

NCBI taxonomy Id: 6334
Other names: T. spiralis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AQR	CDC5L	A0A0V1BJJ0	E5RZ21	Intron-binding protein aquarius.	Cell division cycle 5-like protein.	0.949
AQR	CRNKL1	A0A0V1BJJ0	E5SKH0	Intron-binding protein aquarius.	Crooked neck-like protein 1.	0.980
AQR	Cdc40	A0A0V1BJJ0	A0A0V1ASP6	Intron-binding protein aquarius.	Pre-mRNA-processing factor 17.	0.919
AQR	EFTUD2	A0A0V1BJJ0	A0A0V1BXT7	Intron-binding protein aquarius.	U5 small nuclear ribonucleoprotein component.	0.952
AQR	Prpf19	A0A0V1BJJ0	A0A0V1BTE9	Intron-binding protein aquarius.	Pre-mRNA-processing factor 19.	0.982
AQR	SF3B2	A0A0V1BJJ0	A0A0V1AXJ3	Intron-binding protein aquarius.	Splicing factor 3B subunit 2.	0.441
AQR	SNW1	A0A0V1BJJ0	A0A0V1C2F2	Intron-binding protein aquarius.	SNW domain-containing protein 1.	0.959
AQR	T01_12545	A0A0V1BJJ0	A0A0V1B6F0	Intron-binding protein aquarius.	Peptidyl-prolyl cis-trans isomerase E.	0.960
AQR	T01_13885	A0A0V1BJJ0	A0A0V1BQQ4	Intron-binding protein aquarius.	Protein BUD31-like protein.	0.961
AQR	XAB2	A0A0V1BJJ0	A0A0V1AYJ6	Intron-binding protein aquarius.	Pre-mRNA-splicing factor SYF1.	0.987
CDC5L	AQR	E5RZ21	A0A0V1BJJ0	Cell division cycle 5-like protein.	Intron-binding protein aquarius.	0.949
CDC5L	CRNKL1	E5RZ21	E5SKH0	Cell division cycle 5-like protein.	Crooked neck-like protein 1.	0.972
CDC5L	Cdc40	E5RZ21	A0A0V1ASP6	Cell division cycle 5-like protein.	Pre-mRNA-processing factor 17.	0.964
CDC5L	EFTUD2	E5RZ21	A0A0V1BXT7	Cell division cycle 5-like protein.	U5 small nuclear ribonucleoprotein component.	0.962
CDC5L	Prpf19	E5RZ21	A0A0V1BTE9	Cell division cycle 5-like protein.	Pre-mRNA-processing factor 19.	0.988
CDC5L	SF3B2	E5RZ21	A0A0V1AXJ3	Cell division cycle 5-like protein.	Splicing factor 3B subunit 2.	0.944
CDC5L	SNW1	E5RZ21	A0A0V1C2F2	Cell division cycle 5-like protein.	SNW domain-containing protein 1.	0.971
CDC5L	T01_12545	E5RZ21	A0A0V1B6F0	Cell division cycle 5-like protein.	Peptidyl-prolyl cis-trans isomerase E.	0.793
CDC5L	T01_13885	E5RZ21	A0A0V1BQQ4	Cell division cycle 5-like protein.	Protein BUD31-like protein.	0.956
CDC5L	XAB2	E5RZ21	A0A0V1AYJ6	Cell division cycle 5-like protein.	Pre-mRNA-splicing factor SYF1.	0.968