STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLCB4Phosphoinositide phospholipase C. (3574 aa)    
Predicted Functional Partners:
INADL
InaD-like protein.
   
 
 0.642
gpr54
G-protein coupled receptor 54.
   
 0.630
unc-89-2
Muscle M-line assembly protein unc-89.
   
 
 0.619
unc-89-3
Muscle M-line assembly protein unc-89.
   
 
 0.616
T01_13764
Uncharacterized protein.
   
 
 0.610
Kalrn
Triple functional domain protein.
   
 
 0.610
Plcg1
Phosphoinositide phospholipase C.
     
0.606
Gnaq
Guanine nucleotide-binding protein G(Q) subunit alpha.
   
 0.594
T01_11570
Uncharacterized protein.
   
 0.428
Pip5k1a
Phosphatidylinositol 4-phosphate 5-kinase type-1 alpha.
   
 0.428
Your Current Organism:
Trichinella spiralis
NCBI taxonomy Id: 6334
Other names: T. spiralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.