STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T01_13187Cysteine string protein. (239 aa)    
Predicted Functional Partners:
HSPA8
Heat shock cognate 71 kDa protein; Belongs to the heat shock protein 70 family.
 
 0.917
CDC5L
Cell division cycle 5-like protein.
   
 
 0.911
PLRG1
Pleiotropic regulator 1.
    
 
 0.911
tfip11
Tuftelin-interacting protein 11.
    
 
 0.908
unc-10
Rab-3-interacting molecule unc-10.
     
 0.908
CRNKL1
Crooked neck-like protein 1.
   
 
 0.892
T01_13885
Protein BUD31-like protein.
    
   0.889
Prpf19
Pre-mRNA-processing factor 19.
    
   0.889
HSPA13
Heat shock 70 kDa protein 13.
 
 0.876
HSPA9
Stress-70 protein, mitochondrial; Belongs to the heat shock protein 70 family.
 
 0.845
Your Current Organism:
Trichinella spiralis
NCBI taxonomy Id: 6334
Other names: T. spiralis
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.