STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
baf-1Barrier-to-autointegration factor 1. (262 aa)    
Predicted Functional Partners:
T01_8846
LEM domain-containing protein.
    
 0.917
PPP2R2D
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
    
 0.661
RBM39
RNA-binding protein 39.
   
 0.648
LEMD3
Inner nuclear membrane protein Man1.
   
 0.640
ifa-1
Intermediate filament protein ifa-1; Belongs to the intermediate filament family.
   
 0.601
LamC
Lamin-C; Belongs to the intermediate filament family.
   
 0.601
T01_5851
Intermediate filament protein B; Belongs to the intermediate filament family.
   
 0.601
PPP2CB
Serine/threonine-protein phosphatase.
   
 
  0.560
PPP2R1A
Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform.
   
 
  0.556
Your Current Organism:
Trichinella spiralis
NCBI taxonomy Id: 6334
Other names: T. spiralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.