STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTPN23Tyrosine-protein phosphatase non-receptor type 23. (1317 aa)    
Predicted Functional Partners:
Stam
Signal transducing adapter molecule 1.
   
 0.981
chmp4b
Charged multivesicular body protein 4b.
   
 0.978
sem-5
Sex muscle abnormal protein 5.
   
 0.966
Egfr
Receptor protein-tyrosine kinase.
    
 0.869
pmk-1
Mitogen-activated protein kinase.
   
 0.831
MAPK1
Mitogen-activated protein kinase 1.
   
 0.831
C05D10.2
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
   
 0.831
HGS
Metalloendopeptidase.
   
 0.821
Kibra
Protein kibra.
    
 0.779
sta-1
Signal transducer and activator of transcription.
   
 0.769
Your Current Organism:
Trichinella spiralis
NCBI taxonomy Id: 6334
Other names: T. spiralis
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