STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rps3-a40S ribosomal protein S3-A. (335 aa)    
Predicted Functional Partners:
rps30a
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.999
Rps11
40S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
  
 0.997
RPS23
40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
  
 0.997
RpS15Aa
40S ribosomal protein S15a; Belongs to the universal ribosomal protein uS8 family.
  
 0.997
RPS18
40S ribosomal protein S18.
  
 0.997
RPS15
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
  
 0.997
rps-9
40S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.
  
 0.997
rpsa
40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
  
 0.996
RpS16
40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family.
  
 0.996
rps20
40S ribosomal protein S20.
  
 0.996
Your Current Organism:
Trichinella spiralis
NCBI taxonomy Id: 6334
Other names: T. spiralis
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