STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
osaTrithorax group protein osa. (1984 aa)    
Predicted Functional Partners:
Smarca2
Putative global transcription activator SNF2L2.
   
 0.980
Smarcc2
SWI/SNF complex subunit SMARCC2.
   
 0.972
smarcb1
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1.
    
 0.960
Smarce1
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1.
    
 0.934
SMARCD1
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1.
    
 0.915
Dpf3
Zinc finger protein DPF3.
    
 
 0.752
UAF30
Upstream activation factor subunit UAF30.
    
 0.741
ACTL6A
Actin-like protein 6A; Belongs to the actin family.
    
 0.632
ACTL6A-2
Actin-like protein 6A; Belongs to the actin family.
    
 0.632
Runx1
Runt-related transcription factor 1.
    
 0.602
Your Current Organism:
Trichinella spiralis
NCBI taxonomy Id: 6334
Other names: T. spiralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.