STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRBA2-2KRAB-A domain-containing protein 2. (343 aa)    
Predicted Functional Partners:
SCAND3-12
SCAN domain-containing protein 3.
 
  
  0.900
ZBED5-14
Zinc finger BED domain-containing protein 5.
 
      0.881
ZBED5-10
Zinc finger BED domain-containing protein 5.
 
      0.714
ZBED5-11
Zinc finger BED domain-containing protein 5.
 
      0.702
ZBED5-17
Zinc finger BED domain-containing protein 5.
 
  
  0.697
ZBED5-7
Zinc finger BED domain-containing protein 5.
 
      0.693
FANCM
Fanconi anemia group M protein.
    
  0.475
ZBED5-12
Zinc finger BED domain-containing protein 5.
 
  
  0.412
Your Current Organism:
Trichinella spiralis
NCBI taxonomy Id: 6334
Other names: T. spiralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.