Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EME1 | ERCC1 | A0A0V1BRM9 | A0A0V1BEK9 | Crossover junction endonuclease EME1. | DNA excision repair protein ERCC-1. | 0.709 |
EME1 | ERCC4 | A0A0V1BRM9 | E5SY81 | Crossover junction endonuclease EME1. | DNA repair endonuclease XPF. | 0.727 |
EME1 | ERCC5 | A0A0V1BRM9 | A0A0V1BHV8 | Crossover junction endonuclease EME1. | DNA repair protein. | 0.423 |
EME1 | FANCM | A0A0V1BRM9 | A0A0V1AXH6 | Crossover junction endonuclease EME1. | Fanconi anemia group M protein. | 0.745 |
EME1 | INO80 | A0A0V1BRM9 | A0A0V1ANI9 | Crossover junction endonuclease EME1. | DNA helicase INO80. | 0.460 |
EME1 | RAD51 | A0A0V1BRM9 | A0A0V1C303 | Crossover junction endonuclease EME1. | DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Underwinds duplex DNA. Belongs to the RecA family. RAD51 subfamily. | 0.787 |
EME1 | TOP3A | A0A0V1BRM9 | E5SGH1 | Crossover junction endonuclease EME1. | DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. | 0.689 |
EME1 | him-6 | A0A0V1BRM9 | A0A0V1BFD1 | Crossover junction endonuclease EME1. | Bloom syndrome-like protein. | 0.460 |
EME1 | mus81 | A0A0V1BRM9 | A0A0V1B7J6 | Crossover junction endonuclease EME1. | Crossover junction endonuclease MUS81. | 0.977 |
EME1 | rmi1 | A0A0V1BRM9 | A0A0V1B452 | Crossover junction endonuclease EME1. | RecQ-mediated genome instability protein 1. | 0.635 |
ERCC1 | EME1 | A0A0V1BEK9 | A0A0V1BRM9 | DNA excision repair protein ERCC-1. | Crossover junction endonuclease EME1. | 0.709 |
ERCC1 | ERCC4 | A0A0V1BEK9 | E5SY81 | DNA excision repair protein ERCC-1. | DNA repair endonuclease XPF. | 0.988 |
ERCC1 | ERCC5 | A0A0V1BEK9 | A0A0V1BHV8 | DNA excision repair protein ERCC-1. | DNA repair protein. | 0.854 |
ERCC1 | FANCM | A0A0V1BEK9 | A0A0V1AXH6 | DNA excision repair protein ERCC-1. | Fanconi anemia group M protein. | 0.997 |
ERCC1 | INO80 | A0A0V1BEK9 | A0A0V1ANI9 | DNA excision repair protein ERCC-1. | DNA helicase INO80. | 0.459 |
ERCC1 | RAD51 | A0A0V1BEK9 | A0A0V1C303 | DNA excision repair protein ERCC-1. | DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Underwinds duplex DNA. Belongs to the RecA family. RAD51 subfamily. | 0.633 |
ERCC1 | TOP3A | A0A0V1BEK9 | E5SGH1 | DNA excision repair protein ERCC-1. | DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. | 0.504 |
ERCC1 | him-6 | A0A0V1BEK9 | A0A0V1BFD1 | DNA excision repair protein ERCC-1. | Bloom syndrome-like protein. | 0.459 |
ERCC1 | mus81 | A0A0V1BEK9 | A0A0V1B7J6 | DNA excision repair protein ERCC-1. | Crossover junction endonuclease MUS81. | 0.944 |
ERCC4 | EME1 | E5SY81 | A0A0V1BRM9 | DNA repair endonuclease XPF. | Crossover junction endonuclease EME1. | 0.727 |
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