STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MPP5MAGUK p55 subfamily member 5; Belongs to the MAGUK family. (2453 aa)    
Predicted Functional Partners:
unc-10
Rab-3-interacting molecule unc-10.
   
 0.930
DLG5
Disks large-like protein 5.
   
 0.752
lin-10
Protein lin-10.
    
 0.743
INADL
InaD-like protein.
    
 0.728
Lin7b
Protein lin-7-like protein B.
   
0.718
GART
Trifunctional purine biosynthetic protein adenosine-3.
  
 
 0.658
T01_4380
Uncharacterized protein.
  
 
 0.639
Vangl1
Vang-like protein 1.
    
 0.597
POLR2F
DNA-directed RNA polymerases I, II, and III subunit RPABC2.
  
  
 0.569
EPB41L5
Band 4.1-like protein 5.
    
 0.546
Your Current Organism:
Trichinella spiralis
NCBI taxonomy Id: 6334
Other names: T. spiralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.