STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pmk-1Mitogen-activated protein kinase. (661 aa)    
Predicted Functional Partners:
Mapkapk3
MAP kinase-activated protein kinase 3; Belongs to the protein kinase superfamily.
  
0.996
DUSP16
Dual specificity protein phosphatase 16.
   
 0.989
Dusp7
Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.
   
 0.972
Map2k3
Dual specificity mitogen-activated protein kinase kinase 3.
   
0.960
foxo
Forkhead box protein O.
   
 0.943
MEF2A
Myocyte-specific enhancer factor 2A.
   
 0.912
MAP2K1
Dual specificity mitogen-activated protein kinase-like kinase; Belongs to the protein kinase superfamily.
  
0.910
kay
Transcription factor kayak.
   
 0.893
PTPN23
Tyrosine-protein phosphatase non-receptor type 23.
   
 0.831
JUN
Transcription factor AP-1.
    
 0.766
Your Current Organism:
Trichinella spiralis
NCBI taxonomy Id: 6334
Other names: T. spiralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.