STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T01_13580Uncharacterized protein. (989 aa)    
Predicted Functional Partners:
INTS1
Integrator complex subunit 1.
    
 0.955
INTS7
Integrator complex subunit 7.
    
 0.955
Ints10
Integrator complex subunit 10.
    
 0.949
cpsf3l
Integrator complex subunit 11.
    
 0.933
INTS3
Integrator complex subunit 3.
   
 0.933
asun
Protein asunder-like protein.
    
 0.931
Ints12
Integrator complex subunit 12.
    
 0.930
Polr2g
DNA-directed RNA polymerase II subunit RPB7.
    
 0.888
Polr2b
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.887
rpb-8
Putative DNA-directed RNA polymerases I, II, and III subunit RPABC3.
    
  0.879
Your Current Organism:
Trichinella spiralis
NCBI taxonomy Id: 6334
Other names: T. spiralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.