STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Prss30Serine protease 30; Belongs to the peptidase S1 family. (1188 aa)    
Predicted Functional Partners:
Act5C-2
Actin-5C.
    
 0.703
unc-54
Myosin-4; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 
 0.684
rpsa
40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
      
 0.675
TOLLIP
Toll-interacting protein.
   
 
 0.674
ifa-1
Intermediate filament protein ifa-1; Belongs to the intermediate filament family.
   
 
 0.670
vha-17
V-type proton ATPase subunit e.
      
 0.668
Vha68-2
V-type proton ATPase catalytic subunit A.
      
 0.666
Psmc2
26S protease regulatory subunit 7; Belongs to the AAA ATPase family.
      
 0.666
myo-3
Myosin-3; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 
 0.612
unc-15
Paramyosin.
    
 
 0.612
Your Current Organism:
Trichinella spiralis
NCBI taxonomy Id: 6334
Other names: T. spiralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.