Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lsm3 | Lsm4 | A0A0V1BTR3 | A0A0V1AXE8 | U6 snRNA-associated Sm-like protein LSm3. | U6 snRNA-associated Sm-like protein LSm4. | 0.940 |
Lsm3 | Lsm6 | A0A0V1BTR3 | A0A0V1BS76 | U6 snRNA-associated Sm-like protein LSm3. | U6 snRNA-associated Sm-like protein LSm6. | 0.960 |
Lsm3 | NAA38 | A0A0V1BTR3 | A0A0V1B3L2 | U6 snRNA-associated Sm-like protein LSm3. | U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.993 |
Lsm3 | PRPF3 | A0A0V1BTR3 | A0A0V1BAV9 | U6 snRNA-associated Sm-like protein LSm3. | U4/U6 small nuclear ribonucleoprotein Prp3. | 0.807 |
Lsm3 | PRPF4 | A0A0V1BTR3 | A0A0V1BPY8 | U6 snRNA-associated Sm-like protein LSm3. | 1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family. | 0.801 |
Lsm3 | SART3 | A0A0V1BTR3 | A0A0V1BEN1 | U6 snRNA-associated Sm-like protein LSm3. | Squamous cell carcinoma antigen recognized by T-cells 3. | 0.813 |
Lsm3 | prpf31 | A0A0V1BTR3 | A0A0V1BV12 | U6 snRNA-associated Sm-like protein LSm3. | U4/U6 small nuclear ribonucleoprotein Prp31. | 0.805 |
Lsm4 | Lsm3 | A0A0V1AXE8 | A0A0V1BTR3 | U6 snRNA-associated Sm-like protein LSm4. | U6 snRNA-associated Sm-like protein LSm3. | 0.940 |
Lsm4 | Lsm6 | A0A0V1AXE8 | A0A0V1BS76 | U6 snRNA-associated Sm-like protein LSm4. | U6 snRNA-associated Sm-like protein LSm6. | 0.988 |
Lsm4 | NAA38 | A0A0V1AXE8 | A0A0V1B3L2 | U6 snRNA-associated Sm-like protein LSm4. | U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.983 |
Lsm4 | PRPF3 | A0A0V1AXE8 | A0A0V1BAV9 | U6 snRNA-associated Sm-like protein LSm4. | U4/U6 small nuclear ribonucleoprotein Prp3. | 0.917 |
Lsm4 | PRPF4 | A0A0V1AXE8 | A0A0V1BPY8 | U6 snRNA-associated Sm-like protein LSm4. | 1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family. | 0.902 |
Lsm4 | SART3 | A0A0V1AXE8 | A0A0V1BEN1 | U6 snRNA-associated Sm-like protein LSm4. | Squamous cell carcinoma antigen recognized by T-cells 3. | 0.945 |
Lsm4 | T01_12287 | A0A0V1AXE8 | E5S2M3 | U6 snRNA-associated Sm-like protein LSm4. | Uncharacterized protein. | 0.940 |
Lsm4 | prpf31 | A0A0V1AXE8 | A0A0V1BV12 | U6 snRNA-associated Sm-like protein LSm4. | U4/U6 small nuclear ribonucleoprotein Prp31. | 0.934 |
Lsm6 | Lsm3 | A0A0V1BS76 | A0A0V1BTR3 | U6 snRNA-associated Sm-like protein LSm6. | U6 snRNA-associated Sm-like protein LSm3. | 0.960 |
Lsm6 | Lsm4 | A0A0V1BS76 | A0A0V1AXE8 | U6 snRNA-associated Sm-like protein LSm6. | U6 snRNA-associated Sm-like protein LSm4. | 0.988 |
Lsm6 | NAA38 | A0A0V1BS76 | A0A0V1B3L2 | U6 snRNA-associated Sm-like protein LSm6. | U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.988 |
Lsm6 | PRPF3 | A0A0V1BS76 | A0A0V1BAV9 | U6 snRNA-associated Sm-like protein LSm6. | U4/U6 small nuclear ribonucleoprotein Prp3. | 0.909 |
Lsm6 | PRPF4 | A0A0V1BS76 | A0A0V1BPY8 | U6 snRNA-associated Sm-like protein LSm6. | 1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family. | 0.905 |
page 1 of 5