STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEC63Translocation protein SEC63-like protein. (1107 aa)    
Predicted Functional Partners:
Sec61a2
Protein transport protein Sec61 subunit alpha isoform 2.
   
 
 0.985
SEC61B
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.
    
 
 0.976
sec61g
Protein transport protein Sec61 subunit gamma.
    
 
 0.976
T01_9013
Uncharacterized protein.
   
 
 0.897
T01_13944
Uncharacterized protein.
   
 
 0.897
T01_8638
Uncharacterized protein.
   
 
 0.897
SEC62
Translocation protein SEC62.
   
 
 0.897
Stk39
STE20/SPS1-related proline-alanine-rich protein kinase.
    
 
 0.852
STRADA
STE20-related kinase adapter protein alpha.
    
 
 0.852
hyou1
Hypoxia up-regulated protein 1.
  
 
 0.823
Your Current Organism:
Trichinella spiralis
NCBI taxonomy Id: 6334
Other names: T. spiralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.