STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AP3M1AP-3 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family. (431 aa)    
Predicted Functional Partners:
Ap3d1
AP-3 complex subunit delta-1.
   
 0.995
Tom1l2
AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family.
   
 0.976
MAPRE3
AP-3 complex subunit sigma-2.
   
 0.934
hmu-2
Halomucin; Belongs to the tetraspanin (TM4SF) family.
   
 
 0.865
AP1G1
AP-1 complex subunit gamma-1.
   
 
 0.759
dnaJ2
Chaperone protein DnaJ 2.
   
 
 0.718
WDFY3
WD repeat and FYVE domain-containing protein 3.
      
 0.590
AP1S2
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
     
 0.564
dpy-23
AP-2 complex subunit mu; Belongs to the adaptor complexes medium subunit family.
     
0.551
AP1M1
AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.
   
0.453
Your Current Organism:
Trichinella spiralis
NCBI taxonomy Id: 6334
Other names: T. spiralis
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