STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Srsf4Serine/arginine-rich splicing factor 4. (723 aa)    
Predicted Functional Partners:
U2af50
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 0.888
SRSF2
Serine/arginine-rich splicing factor 2.
   
 0.848
Tra2b
Transformer-2-like protein beta.
   
0.834
Srsf3
Serine/arginine-rich splicing factor 3.
   
0.821
Srsf3-2
Serine/arginine-rich splicing factor 3.
   
0.821
Cbp80
Nuclear cap-binding protein subunit 1.
   
 0.819
hrp-1
Heterogeneous nuclear ribonucleoprotein A1.
   
 0.805
rsp-7
Putative splicing factor, arginine/serine-rich 7; Belongs to the GST superfamily.
   
 0.798
SRRM1
Serine/arginine repetitive matrix protein 1.
   
 0.793
K07C5.6
Pre-mRNA-splicing factor SLU7.
    
 0.793
Your Current Organism:
Trichinella spiralis
NCBI taxonomy Id: 6334
Other names: T. spiralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.