STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pola1DNA polymerase. (1489 aa)    
Predicted Functional Partners:
POLA2
DNA polymerase alpha subunit B.
   
 0.996
Prim1
DNA primase small subunit.
   
 0.991
wdhd1
WD repeat and HMG-box DNA-binding protein 1.
   
 
 0.984
POLE
DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.
   
 0.980
Prim2-3
DNA primase large subunit.
   
 0.971
POLE2
DNA polymerase epsilon subunit 2.
   
 0.968
MCM4
DNA helicase; Belongs to the MCM family.
   
 0.958
Prim2
DNA primase large subunit.
   
 0.957
Prim2-2
DNA primase large subunit.
   
 0.957
CDC45
Cell division control protein 45-like protein.
   
 0.955
Your Current Organism:
Trichinella spiralis
NCBI taxonomy Id: 6334
Other names: T. spiralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.