Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DUSP16 | MAP3K12 | A0A0V1BQR3 | A0A0V1BJ25 | Dual specificity protein phosphatase 16. | Mitogen-activated protein kinase kinase kinase. | 0.408 |
MAP3K12 | DUSP16 | A0A0V1BJ25 | A0A0V1BQR3 | Mitogen-activated protein kinase kinase kinase. | Dual specificity protein phosphatase 16. | 0.408 |
MAP3K12 | fsn-1 | A0A0V1BJ25 | E5SGV3 | Mitogen-activated protein kinase kinase kinase. | F-box/SPRY domain-containing protein 1. | 0.420 |
MAP3K12 | rpm-1 | A0A0V1BJ25 | A0A0V1AVF6 | Mitogen-activated protein kinase kinase kinase. | E3 ubiquitin-protein ligase rpm-1. | 0.696 |
fsn-1 | MAP3K12 | E5SGV3 | A0A0V1BJ25 | F-box/SPRY domain-containing protein 1. | Mitogen-activated protein kinase kinase kinase. | 0.420 |
fsn-1 | rpm-1 | E5SGV3 | A0A0V1AVF6 | F-box/SPRY domain-containing protein 1. | E3 ubiquitin-protein ligase rpm-1. | 0.925 |
rpm-1 | MAP3K12 | A0A0V1AVF6 | A0A0V1BJ25 | E3 ubiquitin-protein ligase rpm-1. | Mitogen-activated protein kinase kinase kinase. | 0.696 |
rpm-1 | fsn-1 | A0A0V1AVF6 | E5SGV3 | E3 ubiquitin-protein ligase rpm-1. | F-box/SPRY domain-containing protein 1. | 0.925 |