STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hmu-2Halomucin; Belongs to the tetraspanin (TM4SF) family. (549 aa)    
Predicted Functional Partners:
MAPRE3
AP-3 complex subunit sigma-2.
    
 0.924
pusl1
Cyclin-G-associated kinase.
   
  0.918
Ap3d1
AP-3 complex subunit delta-1.
   
 0.909
AP3M1
AP-3 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.
   
 
 0.865
AP1G1
AP-1 complex subunit gamma-1.
   
 0.834
dnaJ2
Chaperone protein DnaJ 2.
   
 0.688
AP1M1
AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.
   
 
 0.648
AP1S2
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
   
 
 0.641
AP2B1
AP complex subunit beta.
    
 0.611
Snx2
Sorting nexin-2.
    
 0.594
Your Current Organism:
Trichinella spiralis
NCBI taxonomy Id: 6334
Other names: T. spiralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.