STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T01_3713Uncharacterized protein. (1498 aa)    
Predicted Functional Partners:
ARHGEF1
Rho guanine nucleotide exchange factor 12.
   
 0.577
F52B11.2
Guanine nucleotide-binding protein alpha-12 subunit.
    
  0.549
Kalrn
Triple functional domain protein.
   
 
0.453
PLEKHG5
Pleckstrin homology domain-containing family G member 5.
    
 0.451
Arhgef2
Rho guanine nucleotide exchange factor 2.
   
 0.448
unc-89-2
Muscle M-line assembly protein unc-89.
   
 
 0.447
unc-89-3
Muscle M-line assembly protein unc-89.
   
 
 0.447
ITSN1
Intersectin-1.
    
0.439
T01_13764
Uncharacterized protein.
   
 
 0.436
TONSL
Tonsoku-like protein.
   
 
 0.416
Your Current Organism:
Trichinella spiralis
NCBI taxonomy Id: 6334
Other names: T. spiralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.