STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N-2Neurogenic locus Notch protein. (344 aa)    
Predicted Functional Partners:
unc-89-2
Muscle M-line assembly protein unc-89.
   
 0.580
unc-89-3
Muscle M-line assembly protein unc-89.
   
 0.580
Su(H)
Suppressor of hairless protein.
    
 0.565
TONSL
Tonsoku-like protein.
   
 0.528
PTK7
Inactive tyrosine-protein kinase 7; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.493
NOTCH3
Neurogenic locus notch-like protein 3.
  
     0.485
Fbp2
Fructose-1,6-bisphosphatase isozyme 2; Belongs to the FBPase class 1 family.
 
  
   0.452
FAT1-2
Protocadherin Fat 1.
  
     0.436
SRPK1
SRSF protein kinase 1.
    
 
 0.431
Your Current Organism:
Trichinella spiralis
NCBI taxonomy Id: 6334
Other names: T. spiralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.