STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cor-1Coronin-like protein cor-1. (1512 aa)    
Predicted Functional Partners:
DHFR
Dihydrofolate reductase.
    
 0.781
FPGS
Folylpolyglutamate synthase, mitochondrial.
    
 0.737
unc-60
Actin-depolymerizing factor 2, isoform c; Belongs to the actin-binding proteins ADF family.
   
 
 0.710
TYMS
Thymidylate synthase.
    
 0.699
Ube4b
Ubiquitin conjugation factor E4 B.
     
 0.677
Gch1
GTP cyclohydrolase 1.
    
 0.648
RFK
Riboflavin kinase.
  
 
 0.635
Mocs1
Molybdenum cofactor biosynthesis protein 1.
    
 0.624
lcp1
Plastin-2.
   
 
 0.596
Myo1e
Unconventional myosin-If; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 
 0.573
Your Current Organism:
Trichinella spiralis
NCBI taxonomy Id: 6334
Other names: T. spiralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.