STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
usf1Upstream stimulatory factor 1. (356 aa)    
Predicted Functional Partners:
USF2
Upstream stimulatory factor 2.
    
0.935
ftt2
14-3-3-like protein 2; Belongs to the 14-3-3 family.
    
 0.703
CREBBP
CREB-binding protein.
    
 0.575
cbp-1
Protein cbp-1.
    
 0.575
Ep300
Histone acetyltransferase.
    
 0.575
RICTOR
Rapamycin-insensitive companion of mTOR.
      
 0.499
mlst8
Target of rapamycin complex subunit lst8.
    
 
 0.466
RRAGD
Ras-related GTP-binding protein D.
    
 
 0.440
TFAP4
Helix-loop-helix protein 11.
    
 
 0.420
srebf2
Sterol regulatory element-binding protein 2.
    
 
 0.410
Your Current Organism:
Trichinella spiralis
NCBI taxonomy Id: 6334
Other names: T. spiralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.