T01_2456 protein (Trichinella spiralis) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

T01_2456

Uncharacterized protein. (334 aa)

Predicted Functional Partners:

rps30a

0.802

RpS15Aa

0.517

RPS24

0.482

RPS15

0.477

Rps14

0.470

Rps11

0.458

RPS19S

0.457

RPS12

0.439

RPS18

0.421

RPS3A

0.417

Your Current Organism:

Trichinella spiralis

NCBI taxonomy Id: 6334
Other names: T. spiralis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RPS12	RPS15	E5S6T2	E5SEL9	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.	40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.	0.995
RPS12	RPS18	E5S6T2	A0A0V1BQL9	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.	40S ribosomal protein S18.	0.995
RPS12	RPS19S	E5S6T2	A0A0V1BDA9	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.	40S ribosomal protein S19S.	0.995
RPS12	RPS24	E5S6T2	A0A0V0YSW8	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.	40S ribosomal protein S24.	0.995
RPS12	RPS3A	E5S6T2	A0A0V1C1E5	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.	40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.	0.993
RPS12	RpS15Aa	E5S6T2	A0A0V1BL41	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.	40S ribosomal protein S15a; Belongs to the universal ribosomal protein uS8 family.	0.994
RPS12	Rps11	E5S6T2	A0A0V1APT6	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.	40S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.	0.994
RPS12	Rps14	E5S6T2	E5SAZ9	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.	40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.	0.995
RPS12	T01_2456	E5S6T2	A0A0V1BRP1	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.	Uncharacterized protein.	0.439
RPS12	rps30a	E5S6T2	A0A0V1B9C0	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.998
RPS15	RPS12	E5SEL9	E5S6T2	40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.	0.995
RPS15	RPS18	E5SEL9	A0A0V1BQL9	40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.	40S ribosomal protein S18.	0.997
RPS15	RPS19S	E5SEL9	A0A0V1BDA9	40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.	40S ribosomal protein S19S.	0.996
RPS15	RPS24	E5SEL9	A0A0V0YSW8	40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.	40S ribosomal protein S24.	0.996
RPS15	RPS3A	E5SEL9	A0A0V1C1E5	40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.	40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.	0.996
RPS15	RpS15Aa	E5SEL9	A0A0V1BL41	40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.	40S ribosomal protein S15a; Belongs to the universal ribosomal protein uS8 family.	0.997
RPS15	Rps11	E5SEL9	A0A0V1APT6	40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.	40S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.	0.997
RPS15	Rps14	E5SEL9	E5SAZ9	40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.	40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.	0.996
RPS15	T01_2456	E5SEL9	A0A0V1BRP1	40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.	Uncharacterized protein.	0.477
RPS15	rps30a	E5SEL9	A0A0V1B9C0	40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.999