STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T01_5962Alpha-glucosidase. (559 aa)    
Predicted Functional Partners:
GBE1
1,4-alpha-glucan-branching enzyme.
  
 
 0.788
Pygl
Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 0.714
Slc7a6
Large neutral amino acids transporter small subunit 1.
   
 0.713
Slc7a7
Y+L amino acid transporter 1.
   
 0.713
SLC7A6
Y+L amino acid transporter 2.
   
 0.713
tps-2
Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 2.
  
 
 0.671
PGM1
Phosphoglucomutase-1.
  
 
 0.627
alh-13
Putative delta-1-pyrroline-5-carboxylate synthase.
  
  
 0.615
Ppm1b
Protein phosphatase 1B.
 
 
  
 0.608
EPRS
Bifunctional glutamate/proline--tRNA ligase.
     
 0.597
Your Current Organism:
Trichinella spiralis
NCBI taxonomy Id: 6334
Other names: T. spiralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.