STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hpd4-hydroxyphenylpyruvate dioxygenase; Belongs to the 4HPPD family. (357 aa)    
Predicted Functional Partners:
got2
Aspartate aminotransferase.
  
 
 0.983
PCCB
Propionyl-CoA carboxylase beta chain, mitochondrial.
  
 
 0.941
T01_1646
Macrophage migration inhibitory factor-like protein.
     
 0.916
ACE
Angiotensin-converting enzyme.
  
 
 0.870
TH1
Negative elongation factor D.
  
 
 0.870
T01C8.5
Aspartate aminotransferase.
  
 
 0.838
COQ2
4-hydroxybenzoate polyprenyltransferase, mitochondrial; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of coenzyme Q (CoQ) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate.
     
 0.828
Acadvl
Very long-chain specific acyl-CoA dehydrogenase, mitochondrial.
  
 
 0.810
ACAD9
Acyl-CoA dehydrogenase family member 9, mitochondrial.
  
 
 0.810
gpt2
Alanine aminotransferase 2.
   
 
 0.797
Your Current Organism:
Trichinella spiralis
NCBI taxonomy Id: 6334
Other names: T. spiralis
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.