STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZBED5-18Zinc finger BED domain-containing protein 5. (117 aa)    
Predicted Functional Partners:
SCAND3-7
SCAN domain-containing protein 3.
  
     0.512
SCAND3-9
SCAN domain-containing protein 3.
  
     0.511
ZBED5-2
Zinc finger BED domain-containing protein 5.
 
     0.473
ZBED5-5
Zinc finger BED domain-containing protein 5.
  
    0.471
ZBED5-10
Zinc finger BED domain-containing protein 5.
 
     0.459
ZBED8-3
Protein ZBED8.
  
     0.442
ZBED5-17
Zinc finger BED domain-containing protein 5.
 
     0.432
ZBED5-8
Zinc finger BED domain-containing protein 5.
  
    0.430
ZBED8-4
Protein ZBED8.
  
     0.402
Your Current Organism:
Trichinella spiralis
NCBI taxonomy Id: 6334
Other names: T. spiralis
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