STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
syd-2Liprin-alpha. (1198 aa)    
Predicted Functional Partners:
Cask
Peripheral plasma membrane protein CASK; Belongs to the MAGUK family.
    
 0.976
unc-10
Rab-3-interacting molecule unc-10.
   
 0.964
T21H8.1
Liprin-beta.
   
0.895
rab-3
Ras-related protein Rab-3.
   
 
 0.891
ptp-3
Tyrosine-protein phosphatase Lar-like.
    
 0.831
unc-13
Phorbol ester/diacylglycerol-binding protein unc-13.
    
 0.823
Bzrap1
Peripheral-type benzodiazepine receptor-associated protein 1.
   
 
 0.813
Syn
Synapsin.
   
 
 0.756
PTPRA
Receptor-type tyrosine-protein phosphatase alpha.
    
 0.743
snt-1
Synaptotagmin-1.
   
 
 0.676
Your Current Organism:
Trichinella spiralis
NCBI taxonomy Id: 6334
Other names: T. spiralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.