STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F52C9.3DAGKc domain-containing protein. (425 aa)    
Predicted Functional Partners:
T01_11145
Uncharacterized protein.
    
 
 0.858
tin-10
Mitochondrial import inner membrane translocase subunit Tim10.
    
 
 0.797
gspd-1
Glucose-6-phosphate 1-dehydrogenase; Catalyzes the rate-limiting step of the oxidative pentose- phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis.
    
 0.649
FA2H
Fatty acid 2-hydroxylase; Belongs to the sterol desaturase family.
    
 
 0.630
Cactin
Cactin.
   
 
 0.621
alh-13
Putative delta-1-pyrroline-5-carboxylate synthase.
   
 
 0.620
IDH2
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
   
 
  0.604
prpf38a
Pre-mRNA-splicing factor 38A.
   
  
 0.426
GAD1
Glutamate decarboxylase 1.
  
 0.424
sepsecs
O-phosphoseryl-tRNA(Sec) selenium transferase.
  
 0.424
Your Current Organism:
Trichinella spiralis
NCBI taxonomy Id: 6334
Other names: T. spiralis
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