Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
HAT1 | HGV2 | A0A0V1BXE4 | E5SFY3 | Histone acetyltransferase type B catalytic subunit. | Protein HGV2. | 0.953 |
HAT1 | MSI3 | A0A0V1BXE4 | A0A0V1AZY9 | Histone acetyltransferase type B catalytic subunit. | Putative histone-binding protein lin-53. | 0.692 |
HAT1 | Orc2 | A0A0V1BXE4 | A0A0V1BPD1 | Histone acetyltransferase type B catalytic subunit. | Origin recognition complex subunit 2. | 0.886 |
HAT1 | Orc4 | A0A0V1BXE4 | A0A0V1BNE3 | Histone acetyltransferase type B catalytic subunit. | Origin recognition complex subunit 4. | 0.885 |
HAT1 | Orc5 | A0A0V1BXE4 | A0A0V1B6E1 | Histone acetyltransferase type B catalytic subunit. | Origin recognition complex subunit 5. | 0.900 |
HAT1 | RBBP7 | A0A0V1BXE4 | A0A0V1B469 | Histone acetyltransferase type B catalytic subunit. | Histone-binding protein RBBP7. | 0.692 |
HAT1 | T01_10030 | A0A0V1BXE4 | A0A0V1B2J0 | Histone acetyltransferase type B catalytic subunit. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.930 |
HAT1 | T01_2654 | A0A0V1BXE4 | A0A0V1BSB6 | Histone acetyltransferase type B catalytic subunit. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.930 |
HAT1 | asf1 | A0A0V1BXE4 | A0A0V1BV21 | Histone acetyltransferase type B catalytic subunit. | Histone chaperone asf1. | 0.879 |
HAT1 | rbbp4 | A0A0V1BXE4 | A0A0V1B546 | Histone acetyltransferase type B catalytic subunit. | Histone-binding protein RBBP4. | 0.692 |
HGV2 | HAT1 | E5SFY3 | A0A0V1BXE4 | Protein HGV2. | Histone acetyltransferase type B catalytic subunit. | 0.953 |
HGV2 | MSI3 | E5SFY3 | A0A0V1AZY9 | Protein HGV2. | Putative histone-binding protein lin-53. | 0.586 |
HGV2 | RBBP7 | E5SFY3 | A0A0V1B469 | Protein HGV2. | Histone-binding protein RBBP7. | 0.586 |
HGV2 | T01_10030 | E5SFY3 | A0A0V1B2J0 | Protein HGV2. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.794 |
HGV2 | T01_2654 | E5SFY3 | A0A0V1BSB6 | Protein HGV2. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.794 |
HGV2 | asf1 | E5SFY3 | A0A0V1BV21 | Protein HGV2. | Histone chaperone asf1. | 0.951 |
HGV2 | rbbp4 | E5SFY3 | A0A0V1B546 | Protein HGV2. | Histone-binding protein RBBP4. | 0.586 |
MSI3 | HAT1 | A0A0V1AZY9 | A0A0V1BXE4 | Putative histone-binding protein lin-53. | Histone acetyltransferase type B catalytic subunit. | 0.692 |
MSI3 | HGV2 | A0A0V1AZY9 | E5SFY3 | Putative histone-binding protein lin-53. | Protein HGV2. | 0.586 |
MSI3 | Orc5 | A0A0V1AZY9 | A0A0V1B6E1 | Putative histone-binding protein lin-53. | Origin recognition complex subunit 5. | 0.405 |
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