STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ttc30bTetratricopeptide repeat protein 30B. (647 aa)    
Predicted Functional Partners:
Ift52
Intraflagellar transport protein 52-like protein.
  
 
 0.978
cluap1
Clusterin-associated protein 1-like protein.
  
 0.968
ift172
Intraflagellar transport protein-like protein.
  
 0.965
Ift57
Intraflagellar transport protein 57-like protein.
   
 0.957
Traf3ip1
TRAF3-interacting protein 1.
    
 0.955
Ift46
Intraflagellar transport protein 46-like protein.
    
 0.947
Ift80
Intraflagellar transport protein 80-like protein.
  
 
 0.926
Ift80-2
Intraflagellar transport protein 80-like protein.
  
 
 0.926
IFT74
Intraflagellar transport protein 74-like protein.
    
 0.919
Gld
Glucose dehydrogenase [FAD, quinone].
    
 0.916
Your Current Organism:
Trichinella spiralis
NCBI taxonomy Id: 6334
Other names: T. spiralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.