STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T01_9022Uncharacterized protein. (358 aa)    
Predicted Functional Partners:
T01_8106
Uncharacterized protein; Belongs to the calycin superfamily. Lipocalin family.
   
  
0.747
dpy-2
Cuticle collagen dpy-2.
   
    0.736
dpy-7
Cuticle collagen dpy-7.
   
    0.736
hgg-1
Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.
   
    0.736
F52C9.5-6
Uncharacterized protein.
   
    0.646
Your Current Organism:
Trichinella spiralis
NCBI taxonomy Id: 6334
Other names: T. spiralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.