STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Flt1Vascular endothelial growth factor receptor 1. (1344 aa)    
Predicted Functional Partners:
sem-5
Sex muscle abnormal protein 5.
   
 0.980
FGFR3
Fibroblast growth factor receptor 3.
    
0.924
Igf1r
Tyrosine-protein kinase receptor.
    
0.914
USP46
Ubiquitin carboxyl-terminal hydrolase; Belongs to the peptidase C19 family.
    
 0.907
T01_995
IlGF domain-containing protein.
     
  0.900
Pik3r3
Phosphatidylinositol 3-kinase regulatory subunit gamma.
    
 0.900
Plcg1
Phosphoinositide phospholipase C.
    
 0.816
gap-2
Ras GTPase-activating protein gap-2.
    
 0.734
RpL13A
60S ribosomal protein L13a.
   
 0.731
Crk
Adapter molecule Crk.
    
 0.718
Your Current Organism:
Trichinella spiralis
NCBI taxonomy Id: 6334
Other names: T. spiralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.