STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T01_523Uncharacterized protein. (315 aa)    
Predicted Functional Partners:
Cul3
Cullin-3; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
    
 0.669
Stk16
Cullin-1; Belongs to the cullin family.
    
 0.669
sconC
E3 ubiquitin ligase complex SCF subunit sconC; Belongs to the SKP1 family.
   
 0.644
Skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
   
 0.644
sconC-2
E3 ubiquitin ligase complex SCF subunit sconC; Belongs to the SKP1 family.
   
 0.644
phr
Deoxyribodipyrimidine photo-lyase.
    
 0.624
pusl1
Cyclin-G-associated kinase.
   
 
 0.617
ERCC6
DNA excision repair protein ERCC-6.
    
 
 0.546
Tceb1
Transcription elongation factor B polypeptide 1; Belongs to the SKP1 family.
    
 0.539
Tceb1-2
Transcription elongation factor B polypeptide 1; Belongs to the SKP1 family.
    
 0.539
Your Current Organism:
Trichinella spiralis
NCBI taxonomy Id: 6334
Other names: T. spiralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.