STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNKSPoly [ADP-ribose] polymerase. (1181 aa)    
Predicted Functional Partners:
axin1
Axin-1.
    
 0.958
rnf146
E3 ubiquitin-protein ligase.
    
 0.933
pten
Phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase PTEN.
   
 0.659
pusl1
Cyclin-G-associated kinase.
   
 0.627
beta-Spec
Spectrin beta chain; Belongs to the spectrin family.
   
 0.617
SPTBN5
Spectrin beta chain, non-erythrocytic 5.
   
 0.617
UBA52-4
Ubiquitin-60S ribosomal protein L40.
    
  0.584
Ykt6
Synaptobrevin-like protein YKT6; Belongs to the synaptobrevin family.
    
  0.548
Gmd
GDP-mannose 4,6 dehydratase.
    
 
 0.523
DLG5
Disks large-like protein 5.
    
 0.520
Your Current Organism:
Trichinella spiralis
NCBI taxonomy Id: 6334
Other names: T. spiralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.