STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prkdcDNA-dependent protein kinase catalytic subunit; Belongs to the PI3/PI4-kinase family. (4008 aa)    
Predicted Functional Partners:
RICTOR
Rapamycin-insensitive companion of mTOR.
   
 0.997
Xrcc5
X-ray repair cross-complementing protein 5.
   
 0.917
dclre1c
Protein artemis.
    
 0.904
mlst8
Target of rapamycin complex subunit lst8.
    
 0.851
Mapkap1
Target of rapamycin complex 2 subunit MAPKAP1.
    
 0.850
LIG4
DNA ligase.
   
 0.833
Rraga
Ras-related GTP-binding protein A.
    
 0.808
RRAGD
Ras-related GTP-binding protein D.
    
 0.802
RPS6KB1
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.792
T01_9986
Uncharacterized protein.
    
 0.780
Your Current Organism:
Trichinella spiralis
NCBI taxonomy Id: 6334
Other names: T. spiralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.